I went back through this whole thread and can't find any specifics on the wiring of your setup, Jason, or yours, Hannahman. If, as keenan guesses, you're using a zone 2 out, or any other out on your receiver, as a 2nd source for the same set of speakers, that's probably the wrong way to go about it, and is probably the source of the hum.
The correct way to bi-amp is taking one L/R set of line-outs from your receiver/pre-pro, splitting it into 2 frequency ranges with a cross-over (giving you L-hi, L-lo, R-hi, and R-lo), amplifying each of these (usually 2 stero amps) to the two sets of terminals on each speaker.
Before you go cutting any grounds, please post details of your setup and lets see if we can figure out any obvious culprits first.