For compact systems I would shy away from the Yamahas. I honestly believe that a DVD receiver that has iPod connectivity probably won't have much output with only a 30 watt power consumption. Most DVD players take at least 10 watts by themselves, leaving a meager 20 watts for the rest of the machine. So 30 watts x 2, yeah, in one of it's wet dreams.
Onkyo's systems of similar cost, and usually lower, have much high power consumption (leads me to conclude it might be able to muster more power for speakers since it's got a bigger power supply. It's wattage output is rated similarly on paper, but I'm more inclined to believe them when the power consumption is 115 watts.
http://www.newegg.com/Product/Product.aspx?Item=N82E16882120099&nm_mc=OTC-Froogle&cm_mmc=OTC-Froogle-_-Shelf+Systems-_-Onkyo-_-82120099
That Onkyo has SACD support, which is pretty cool. You can use different speakers with the system. It also has dedicated discrete outputs for surround left/right, center, and a subwoofer. Strangely Onkyo doesn't seemt offer an amplifier aimed specifically for this system.
The Teac CD receiver in my signature below has a power consumption rating of 75 watts vs. the meager 30 watts of the Yamaha. It does very well, but it has clear limitations when connected to demanding speakers. I can't say anything for the Yamaha being full range, but the amplifier in the Teac's are full range as are the Onkyos. Some micro components have a high pass filter keeping the lowest frequencies from being played through the speakers, it reduces stress on the amplifier but the sound is not "full range". The Yamaha's astoundingly low power consumption makes me feel like it may not have full range output, so bass could be missing. Hopefull the subwoofer output has no filter on it, previous experience with JVC's micro system offerings had a problem with that. No matter how hard I tried, I couldn't get the lowest of lows out of that thing.
Teac also offers DVD/receivers w/ iPod connectivity.
http://www.onecall.com/ProductDetails.aspx?id=97403
Most of the speakers you've chosen have reasonably high sensitivity, meaning you will get more output per watt on a more efficient speaker. Klipsch are renowned for efficiency. The Yamah might do alright some of those, but I feel there are better options as I've indicated with the Onkyo and Teac above if you plan to stick with micro DVD/receivers.