Thank you so much for your pointers.
I had spaced the baffles at an even 4.5" to get the 348 cm /sq cross sectional area. If I progressively space the last three at 4" , 3.5" and finally 3" on exit giving me a 232 cm/sq exit does that accomplish the taper adequately? This would make it a mass loaded TL due to the taper is that correct?
Changing the exit to 232 cm/sq appears to have positively affected the excessive excursion at low frequencies in the model.
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As for the fill material I am fine using poly fill but had read (yeah I know.... gotta love the Internet!) that it was not effective in a TL and that wool was the proper material. Is the 8 grams per liter a good guideline and do I stuff every area of the pipe all the way into the last segment?