Hi Frank,
It may also be that your AS-EQ1 has your Fathoms boosted a little too much in the low frequencies and the Fathoms are simply being over driven. That creates tapping noises that can sound like grille impact. We had a GTG at my house a couple of years ago and both my Fathoms and a pair of SVS PB13’s were too easily driven into over excursion related distress. I sold my Fathoms due to this and now have a slightly over the top sub system as a result

.
If JL doesn’t come up with something that works, you may want to try re-running the AS-EQ1 software. If that doesn’t work, you may need to drop the subs level on your Denon. Actually, that would be a good first step as it takes no time.
Good luck,
Rob