I returned my 8040st's and got the 8060's.
I wish I had an audiophile that could set up my system perfect, that way I could just know I had the best set up possible.
If it were me and I was manually setting up your speakers I would do this:
Crossover main setting to "Individual".
Front L/R - 40hz
Center - 50hz
Everything else - 80hz
Then I would split (Y splitter) the full range low level outputs for the fronts and center, one going to the Emotiva, one going to the low level (LFE) inputs on these three speakers.
Receiver LFE just to the Sub, and experiment with both the LFE and LFE + settings to see which you liked best.
IMO, by doing this your letting your Fronts work to their full ability as truly Full Range speakers, and creating a fuller front sound stage.
Then of you want to experiment you can try this, after tweaking the volume adjustments on the speakers to your liking and listening for a while, go back into your settings and switch your Fronts to Large and make sure your LFE is set to LFE +, it won't hurt anything to try it this way and just see which "you" like best.