Pushy Pete;
Your second option is probably your best, although as Jaxvon noted, you're going to have to overcomes some bass management issues with a parametric EQ so they're not cancelling each other out.
Not sure of your listening environment or configuration, but you may want to consider separating them as much as possible (e.g. two up front, one in back as Timn8ter noted).
Something like Velodyne's SMS-1, which handles up to three subs would help with the cancellation issues and would almost be necessary with three subs, assuming they can produce a decent amount of SPL... -TD