I would not use the "subs" built into those towers as full range subs, in fact I would consider them mid bass drivers at best. I have the 7001s and have them crossed at 40Hz. when set to Large or using the built in subs as subwoofers, the bass becomes muddy and bloated (caused by oevr excersion on the drivers), especially with the lesser 7XXX series I would just hook them up to your mains using plain old 12-16 gauge speaker wire and set the recievers crossover to 40Hz, then all the siganls below 40Hz will be sent to your stand alone sub (which is better built to handle the real low end (unlike the powered towers)
Also by doing what you plan on will get you more inherent problems with possible ground loop hums, double crossovers and most likely lower frequency cancellations with multiple subs trying to reproduce the same frequencies. By setting the 7004s to 40Hz via the reciever there is no issue with frequency cancellation, because everything from 40-80hz is being handled by the towers, everything below 40Hz is being done by the Supercube 1, you are going to find that your bass is tighter, more well controlled, no overlapping frequencies and by placing the sub on the opposite side of the towers you are going to get more overall bass response, by having the towers handle alot of the bass that movie soundtracks are mixed for and your supercube has more power on reserve for the real low end since it doesnt have to handle anything above 40Hz.
Give it a try and I guarantee that this way is far easier to hook up, has less issues that may arise and will give you far better and tighter bass.