If you will be using five to seven high quality speakers, I would definitely take the Harman Kardon. The amplifier is much beefier in the H/K. In turn it should sound more dynamic as it has a more powerful amp. The Yahmaha is full of sound field processing that the H/K does not have. If soundfields are important it may be worth a look. Both are reliable well built units.
Power consumption specs on the two units are vastly different which tells more of the story. The H/K comes in at 1,000 watts while the Yamaha is at 500. You cannot output more than what is taken in. With a typical class a/b amplifier (at rated output) efficency of about 55%, one would expect about 78 watts or so per channel all channels driven simultaneously unclipped on the H/K. On the Yahmaha one could expect about 39 watts per channel all channels driven simultaneously unclipped. This gives the H/K a 3db output/dynamic advantage. If you are serious about music the H/K is the choice to make here.